Fly Terminalia Database

RESULTS

Gene Page Results for Ecdysone receptor

Gene Name

Ecdysone receptor

Abbreviated Gene Name

EcR

CG Name

CG1765

Flybase Name

FBgn0000546

Species

Drosophila melanogaster

Strain

yw; +; +

Sex

Male

28 Hours

28 Hour Expression

hypandrium, phallus, surstylus / epandrial ventral lobe, cercus

download images for EcR

48 Hours

48 Hour Expression

hypandrium, phallus, surstylus, epandrial ventral lobe, cercus

28 Hour In Situs

48 Hour In Situs

RNA-seq 24hr Male Pupal Genitalia (FPKM)

69.7

RNA-seq 28hr Male Pupal Genitalia (FPKM)

53.46

Probe Forward Primer

GACGCAACTCCAGCCACAGA

Probe Reverse Primer

CTCCAACTCCGTTGCCCATC

Predicted Probe Sequence

GACGCAACTCCAGCCACAGAttcaaccacagccacagctccttcccgtctccgctcccgtgcccgcctccgtaaccgcacctggttccttgtccgcggtcagtacgagcagcgaatacatgggcggaagtgcggccataggacccatcacgccggcaaccaccagcagtatcacggctgccgttaccgctagctccaccacatcagcggtaccGATGGGCAACGGAGTTGGAG

Probe Concentration (ng/ul)

359.05

Probe 260:280

2.07

Probe 260:230

2.08

ul of Probe (in 800ul of hyb)

1.6

Length of Colormetric Reaction (minutes)

153

Notes

Contact

University of Pittsburgh

412-624-2267

rebeiz@pitt.edu

Citation

Vincent, B.J.*, Rice, G.R.*, Wong, G.M., Glassford, W.J., Downs, K.I., Shastay, J.L., Charles-Obi, K., Natarajan, M., Gogol, M.M., Zeitlinger, J., Rebeiz, M., 2019. An atlas of transcription factors expressed in the Drosophila melanogaster pupal terminalia. bioRxiv 677260. doi:10.1101/677260

*Since Gavin and Ben contributed equally to this work, please cite it as Rice and Vincent, et al. or Vincent and Rice, et al. We encourage you to flip a coin in deciding between those possibilities

This work is generously supported by NIH grant GM107387

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